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ERX12664283: Illumina NovaSeq 6000 paired end sequencing
1 ILLUMINA (Illumina NovaSeq 6000) run: 46,772 spots, 20.6M bases, 6.8Mb downloads

Submitted by: Institute of Environmental Biotechnology
Study: Endophytic bacterial communities of perennial wheatgrass and annual wheat
show Abstracthide Abstract
Here, we studied the endophytic bacterial microbiome of perennial wheatgrass in comparison with annual wheat in a pan-European gradient. Samples were collected from two plant genotypes (Thinopyrum intermedium L. and Triticum aestivum L.), three compartments (roots, stems, and leaves), three sampling sites (France-St. Marcel, Belgium-Gembloux, Sweden-Lönnstorp), and two harvest years (June 2021 and April 2022). Samples were surface sterilized, DNA was extracted, the 16S rRNA gene fragment (V3-V4) was amplified and the amplicons were sent for high-throughput sequencing. In total, 704 samples were successfully amplified and sequenced.
Sample:
SAMEA115677263 • ERS20186191 • All experiments • All runs
Library:
Name: Library A
Instrument: Illumina NovaSeq 6000
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 46,772 spots, 20.6M bases, 6.8Mb
Run# of Spots# of BasesSizePublished
ERR1329358346,77220.6M6.8Mb2024-07-29

ID:
34424041

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